node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL43566.1 | rplC | SAMN05661044_02481 | SAMN05661044_04093 | Trigger factor. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.998 |
SEL43566.1 | rplD | SAMN05661044_02481 | SAMN05661044_04092 | Trigger factor. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.998 |
SEL43566.1 | rplW | SAMN05661044_02481 | SAMN05661044_04091 | Trigger factor. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
SEL43566.1 | rplX | SAMN05661044_02481 | SAMN05661044_04082 | Trigger factor. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.998 |
SEL43566.1 | rpmC | SAMN05661044_02481 | SAMN05661044_04085 | Trigger factor. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.998 |
SEL43566.1 | rpsB | SAMN05661044_02481 | SAMN05661044_02942 | Trigger factor. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
SEL43566.1 | rpsG | SAMN05661044_02481 | SAMN05661044_01677 | Trigger factor. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
SEL43566.1 | rpsJ | SAMN05661044_02481 | SAMN05661044_01675 | Trigger factor. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
SEL43566.1 | rpsK | SAMN05661044_02481 | SAMN05661044_04069 | Trigger factor. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
SEL43566.1 | rpsU | SAMN05661044_02481 | SAMN05661044_05253 | Trigger factor. | Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.998 |
rplC | SEL43566.1 | SAMN05661044_04093 | SAMN05661044_02481 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Trigger factor. | 0.998 |
rplC | rplD | SAMN05661044_04093 | SAMN05661044_04092 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
rplC | rplW | SAMN05661044_04093 | SAMN05661044_04091 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplC | rplX | SAMN05661044_04093 | SAMN05661044_04082 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
rplC | rpmC | SAMN05661044_04093 | SAMN05661044_04085 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
rplC | rpsB | SAMN05661044_04093 | SAMN05661044_02942 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplC | rpsG | SAMN05661044_04093 | SAMN05661044_01677 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
rplC | rpsJ | SAMN05661044_04093 | SAMN05661044_01675 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rplC | rpsK | SAMN05661044_04093 | SAMN05661044_04069 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplC | rpsU | SAMN05661044_04093 | SAMN05661044_05253 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.998 |