Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL10732.1 | SEL45498.1 | SAMN05661044_02012 | SAMN05661044_02538 | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Fucose permease. | 0.517 |
SEL10732.1 | SEL45529.1 | SAMN05661044_02012 | SAMN05661044_02539 | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | MFS transporter, ACS family, hexuronate transporter. | 0.598 |
SEL45498.1 | SEL10732.1 | SAMN05661044_02538 | SAMN05661044_02012 | Fucose permease. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.517 |
SEL45498.1 | SEL45529.1 | SAMN05661044_02538 | SAMN05661044_02539 | Fucose permease. | MFS transporter, ACS family, hexuronate transporter. | 0.579 |
SEL45529.1 | SEL10732.1 | SAMN05661044_02539 | SAMN05661044_02012 | MFS transporter, ACS family, hexuronate transporter. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.598 |
SEL45529.1 | SEL45498.1 | SAMN05661044_02539 | SAMN05661044_02538 | MFS transporter, ACS family, hexuronate transporter. | Fucose permease. | 0.579 |
SEL45529.1 | SEL45598.1 | SAMN05661044_02539 | SAMN05661044_02541 | MFS transporter, ACS family, hexuronate transporter. | Altronate hydrolase. | 0.408 |
SEL45529.1 | SEL45630.1 | SAMN05661044_02539 | SAMN05661044_02542 | MFS transporter, ACS family, hexuronate transporter. | Tagaturonate reductase. | 0.447 |
SEL45529.1 | SEL79627.1 | SAMN05661044_02539 | SAMN05661044_03369 | MFS transporter, ACS family, hexuronate transporter. | 2-dehydro-3-deoxygluconokinase. | 0.480 |
SEL45529.1 | SEM17966.1 | SAMN05661044_02539 | SAMN05661044_04471 | MFS transporter, ACS family, hexuronate transporter. | Uncharacterized protein. | 0.412 |
SEL45529.1 | uxaC | SAMN05661044_02539 | SAMN05661044_02540 | MFS transporter, ACS family, hexuronate transporter. | Glucuronate isomerase. | 0.611 |
SEL45598.1 | SEL45529.1 | SAMN05661044_02541 | SAMN05661044_02539 | Altronate hydrolase. | MFS transporter, ACS family, hexuronate transporter. | 0.408 |
SEL45598.1 | SEL45630.1 | SAMN05661044_02541 | SAMN05661044_02542 | Altronate hydrolase. | Tagaturonate reductase. | 0.994 |
SEL45598.1 | SEL79627.1 | SAMN05661044_02541 | SAMN05661044_03369 | Altronate hydrolase. | 2-dehydro-3-deoxygluconokinase. | 0.862 |
SEL45598.1 | uxaC | SAMN05661044_02541 | SAMN05661044_02540 | Altronate hydrolase. | Glucuronate isomerase. | 0.740 |
SEL45630.1 | SEL45529.1 | SAMN05661044_02542 | SAMN05661044_02539 | Tagaturonate reductase. | MFS transporter, ACS family, hexuronate transporter. | 0.447 |
SEL45630.1 | SEL45598.1 | SAMN05661044_02542 | SAMN05661044_02541 | Tagaturonate reductase. | Altronate hydrolase. | 0.994 |
SEL45630.1 | SEL79627.1 | SAMN05661044_02542 | SAMN05661044_03369 | Tagaturonate reductase. | 2-dehydro-3-deoxygluconokinase. | 0.797 |
SEL45630.1 | uxaC | SAMN05661044_02542 | SAMN05661044_02540 | Tagaturonate reductase. | Glucuronate isomerase. | 0.984 |
SEL79627.1 | SEL45529.1 | SAMN05661044_03369 | SAMN05661044_02539 | 2-dehydro-3-deoxygluconokinase. | MFS transporter, ACS family, hexuronate transporter. | 0.480 |
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