Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL43086.1 | SEL68963.1 | SAMN05661044_02467 | SAMN05661044_03125 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.749 |
SEL43086.1 | SEL81621.1 | SAMN05661044_02467 | SAMN05661044_03435 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.742 |
SEL43086.1 | SEM15329.1 | SAMN05661044_02467 | SAMN05661044_04375 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.731 |
SEL43086.1 | SEM56558.1 | SAMN05661044_02467 | SAMN05661044_05512 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.744 |
SEL54615.1 | SEL68963.1 | SAMN05661044_02819 | SAMN05661044_03125 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.743 |
SEL54615.1 | SEL81621.1 | SAMN05661044_02819 | SAMN05661044_03435 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.747 |
SEL54615.1 | SEM15329.1 | SAMN05661044_02819 | SAMN05661044_04375 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.587 |
SEL54615.1 | SEM18388.1 | SAMN05661044_02819 | SAMN05661044_04486 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.699 |
SEL54615.1 | SEM56558.1 | SAMN05661044_02819 | SAMN05661044_05512 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.741 |
SEL68939.1 | SEL68963.1 | SAMN05661044_03124 | SAMN05661044_03125 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.878 |
SEL68939.1 | SEL81621.1 | SAMN05661044_03124 | SAMN05661044_03435 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.680 |
SEL68939.1 | SEM15329.1 | SAMN05661044_03124 | SAMN05661044_04375 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.573 |
SEL68939.1 | SEM18388.1 | SAMN05661044_03124 | SAMN05661044_04486 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.617 |
SEL68963.1 | SEL43086.1 | SAMN05661044_03125 | SAMN05661044_02467 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.749 |
SEL68963.1 | SEL54615.1 | SAMN05661044_03125 | SAMN05661044_02819 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.743 |
SEL68963.1 | SEL68939.1 | SAMN05661044_03125 | SAMN05661044_03124 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.878 |
SEL68963.1 | SEL81621.1 | SAMN05661044_03125 | SAMN05661044_03435 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.695 |
SEL68963.1 | SEL81788.1 | SAMN05661044_03125 | SAMN05661044_03440 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.739 |
SEL68963.1 | SEL82492.1 | SAMN05661044_03125 | SAMN05661044_03463 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.713 |
SEL68963.1 | SEM15329.1 | SAMN05661044_03125 | SAMN05661044_04375 | FecR family protein. | FecR family protein. | 0.774 |
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