node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK42629.1 | SEK57124.1 | SAMN05661044_00217 | SAMN05661044_00576 | Excinuclease ABC, A subunit. | DNA polymerase-3 subunit epsilon. | 0.502 |
SEK42629.1 | SEK68448.1 | SAMN05661044_00217 | SAMN05661044_00890 | Excinuclease ABC, A subunit. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.529 |
SEK42629.1 | SEL43312.1 | SAMN05661044_00217 | SAMN05661044_02474 | Excinuclease ABC, A subunit. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.625 |
SEK42629.1 | SEM53069.1 | SAMN05661044_00217 | SAMN05661044_05415 | Excinuclease ABC, A subunit. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.552 |
SEK42629.1 | polA | SAMN05661044_00217 | SAMN05661044_04293 | Excinuclease ABC, A subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.412 |
SEK42629.1 | recA | SAMN05661044_00217 | SAMN05661044_05395 | Excinuclease ABC, A subunit. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.435 |
SEK42629.1 | ruvB | SAMN05661044_00217 | SAMN05661044_04750 | Excinuclease ABC, A subunit. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.467 |
SEK42629.1 | uvrB | SAMN05661044_00217 | SAMN05661044_03514 | Excinuclease ABC, A subunit. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.999 |
SEK42629.1 | uvrC | SAMN05661044_00217 | SAMN05661044_04797 | Excinuclease ABC, A subunit. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.804 |
SEK57124.1 | SEK42629.1 | SAMN05661044_00576 | SAMN05661044_00217 | DNA polymerase-3 subunit epsilon. | Excinuclease ABC, A subunit. | 0.502 |
SEK57124.1 | SEK68448.1 | SAMN05661044_00576 | SAMN05661044_00890 | DNA polymerase-3 subunit epsilon. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.909 |
SEK57124.1 | SEL43312.1 | SAMN05661044_00576 | SAMN05661044_02474 | DNA polymerase-3 subunit epsilon. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.924 |
SEK57124.1 | SEM29500.1 | SAMN05661044_00576 | SAMN05661044_04769 | DNA polymerase-3 subunit epsilon. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.520 |
SEK57124.1 | SEM53069.1 | SAMN05661044_00576 | SAMN05661044_05415 | DNA polymerase-3 subunit epsilon. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.529 |
SEK57124.1 | polA | SAMN05661044_00576 | SAMN05661044_04293 | DNA polymerase-3 subunit epsilon. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.735 |
SEK57124.1 | recA | SAMN05661044_00576 | SAMN05661044_05395 | DNA polymerase-3 subunit epsilon. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.489 |
SEK57124.1 | uvrB | SAMN05661044_00576 | SAMN05661044_03514 | DNA polymerase-3 subunit epsilon. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.997 |
SEK57124.1 | uvrC | SAMN05661044_00576 | SAMN05661044_04797 | DNA polymerase-3 subunit epsilon. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.417 |
SEK68448.1 | SEK42629.1 | SAMN05661044_00890 | SAMN05661044_00217 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Excinuclease ABC, A subunit. | 0.529 |
SEK68448.1 | SEK57124.1 | SAMN05661044_00890 | SAMN05661044_00576 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA polymerase-3 subunit epsilon. | 0.909 |