Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK65742.1 | SEL85259.1 | SAMN05661044_00828 | SAMN05661044_03570 | SatD family (SatD). | MerR HTH family regulatory protein. | 0.407 |
SEL85259.1 | SEK65742.1 | SAMN05661044_03570 | SAMN05661044_00828 | MerR HTH family regulatory protein. | SatD family (SatD). | 0.407 |
SEL85259.1 | SEL85281.1 | SAMN05661044_03570 | SAMN05661044_03571 | MerR HTH family regulatory protein. | Curved DNA-binding protein. | 0.970 |
SEL85259.1 | SEL85309.1 | SAMN05661044_03570 | SAMN05661044_03572 | MerR HTH family regulatory protein. | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 0.543 |
SEL85259.1 | SEM22509.1 | SAMN05661044_03570 | SAMN05661044_04566 | MerR HTH family regulatory protein. | Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family. | 0.488 |
SEL85281.1 | SEL85259.1 | SAMN05661044_03571 | SAMN05661044_03570 | Curved DNA-binding protein. | MerR HTH family regulatory protein. | 0.970 |
SEL85281.1 | SEL85309.1 | SAMN05661044_03571 | SAMN05661044_03572 | Curved DNA-binding protein. | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 0.543 |
SEL85281.1 | SEM22509.1 | SAMN05661044_03571 | SAMN05661044_04566 | Curved DNA-binding protein. | Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family. | 0.420 |
SEL85309.1 | SEL85259.1 | SAMN05661044_03572 | SAMN05661044_03570 | Phosphoribosyl 1,2-cyclic phosphodiesterase. | MerR HTH family regulatory protein. | 0.543 |
SEL85309.1 | SEL85281.1 | SAMN05661044_03572 | SAMN05661044_03571 | Phosphoribosyl 1,2-cyclic phosphodiesterase. | Curved DNA-binding protein. | 0.543 |
SEM22509.1 | SEL85259.1 | SAMN05661044_04566 | SAMN05661044_03570 | Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family. | MerR HTH family regulatory protein. | 0.488 |
SEM22509.1 | SEL85281.1 | SAMN05661044_04566 | SAMN05661044_03571 | Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family. | Curved DNA-binding protein. | 0.420 |