Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK91380.1 | SEK92524.1 | SAMN05661044_01492 | SAMN05661044_01522 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SEK91380.1 | SEL74285.1 | SAMN05661044_01492 | SAMN05661044_03312 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SEK91380.1 | SEM07439.1 | SAMN05661044_01492 | SAMN05661044_04141 | PAS domain S-box-containing protein. | Phage shock protein C (PspC) family protein. | 0.663 |
SEK91380.1 | SEM33698.1 | SAMN05661044_01492 | SAMN05661044_04917 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SEK91380.1 | SEM42173.1 | SAMN05661044_01492 | SAMN05661044_05147 | PAS domain S-box-containing protein. | PAS domain-containing protein. | 0.999 |
SEK91380.1 | SEM50158.1 | SAMN05661044_01492 | SAMN05661044_05352 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SEK92524.1 | SEK91380.1 | SAMN05661044_01522 | SAMN05661044_01492 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SEK92524.1 | SEL74285.1 | SAMN05661044_01522 | SAMN05661044_03312 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SEK92524.1 | SEM07439.1 | SAMN05661044_01522 | SAMN05661044_04141 | PAS domain S-box-containing protein. | Phage shock protein C (PspC) family protein. | 0.981 |
SEK92524.1 | SEM33698.1 | SAMN05661044_01522 | SAMN05661044_04917 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SEK92524.1 | SEM42173.1 | SAMN05661044_01522 | SAMN05661044_05147 | PAS domain S-box-containing protein. | PAS domain-containing protein. | 0.999 |
SEK92524.1 | SEM50158.1 | SAMN05661044_01522 | SAMN05661044_05352 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SEL74285.1 | SEK91380.1 | SAMN05661044_03312 | SAMN05661044_01492 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SEL74285.1 | SEK92524.1 | SAMN05661044_03312 | SAMN05661044_01522 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SEL74285.1 | SEM07439.1 | SAMN05661044_03312 | SAMN05661044_04141 | Signal transduction histidine kinase. | Phage shock protein C (PspC) family protein. | 0.709 |
SEL74285.1 | SEM33698.1 | SAMN05661044_03312 | SAMN05661044_04917 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SEL74285.1 | SEM42173.1 | SAMN05661044_03312 | SAMN05661044_05147 | Signal transduction histidine kinase. | PAS domain-containing protein. | 0.999 |
SEL74285.1 | SEM50158.1 | SAMN05661044_03312 | SAMN05661044_05352 | Signal transduction histidine kinase. | Response regulator receiver domain-containing protein. | 0.999 |
SEM07391.1 | SEM07417.1 | SAMN05661044_04139 | SAMN05661044_04140 | Uncharacterized membrane protein YckC, RDD family. | Hypothetical protein. | 0.638 |
SEM07391.1 | SEM07439.1 | SAMN05661044_04139 | SAMN05661044_04141 | Uncharacterized membrane protein YckC, RDD family. | Phage shock protein C (PspC) family protein. | 0.686 |
page 1 of 3