Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK36340.1 | SEM15375.1 | SAMN05661044_00056 | SAMN05661044_04377 | Alginate lyase. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.407 |
SEK49447.1 | SEM15375.1 | SAMN05661044_00376 | SAMN05661044_04377 | Hypothetical protein. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.486 |
SEL01665.1 | SEM15375.1 | SAMN05661044_01752 | SAMN05661044_04377 | Hypothetical protein. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.419 |
SEL55648.1 | SEM15375.1 | SAMN05661044_02855 | SAMN05661044_04377 | DNA-binding transcriptional regulator, MarR family. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.433 |
SEM15351.1 | SEM15375.1 | SAMN05661044_04376 | SAMN05661044_04377 | RNA polymerase sigma-70 factor, ECF subfamily. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.420 |
SEM15375.1 | SEK36340.1 | SAMN05661044_04377 | SAMN05661044_00056 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Alginate lyase. | 0.407 |
SEM15375.1 | SEK49447.1 | SAMN05661044_04377 | SAMN05661044_00376 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Hypothetical protein. | 0.486 |
SEM15375.1 | SEL01665.1 | SAMN05661044_04377 | SAMN05661044_01752 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Hypothetical protein. | 0.419 |
SEM15375.1 | SEL55648.1 | SAMN05661044_04377 | SAMN05661044_02855 | Uncharacterized conserved protein YndB, AHSA1/START domain. | DNA-binding transcriptional regulator, MarR family. | 0.433 |
SEM15375.1 | SEM15351.1 | SAMN05661044_04377 | SAMN05661044_04376 | Uncharacterized conserved protein YndB, AHSA1/START domain. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.420 |
SEM15375.1 | SEM15395.1 | SAMN05661044_04377 | SAMN05661044_04378 | Uncharacterized conserved protein YndB, AHSA1/START domain. | MutS domain III. | 0.522 |
SEM15375.1 | SEM47102.1 | SAMN05661044_04377 | SAMN05661044_05286 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Transposase zinc-ribbon domain-containing protein. | 0.439 |
SEM15375.1 | SEM61956.1 | SAMN05661044_04377 | SAMN05661044_05643 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Winged helix DNA-binding domain-containing protein. | 0.458 |
SEM15395.1 | SEM15375.1 | SAMN05661044_04378 | SAMN05661044_04377 | MutS domain III. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.522 |
SEM47102.1 | SEM15375.1 | SAMN05661044_05286 | SAMN05661044_04377 | Transposase zinc-ribbon domain-containing protein. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.439 |
SEM61956.1 | SEM15375.1 | SAMN05661044_05643 | SAMN05661044_04377 | Winged helix DNA-binding domain-containing protein. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.458 |