Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK40061.1 | SEK75905.1 | SAMN05661044_00153 | SAMN05661044_01070 | Thiol-disulfide isomerase or thioredoxin. | Thiol-disulfide isomerase or thioredoxin. | 0.546 |
SEK40061.1 | SEM24662.1 | SAMN05661044_00153 | SAMN05661044_04663 | Thiol-disulfide isomerase or thioredoxin. | Thioredoxin. | 0.521 |
SEK40061.1 | SEM24700.1 | SAMN05661044_00153 | SAMN05661044_04665 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (R)-S-oxide reductase. | 0.767 |
SEK40061.1 | msrA | SAMN05661044_00153 | SAMN05661044_00243 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEK40061.1 | msrA-2 | SAMN05661044_00153 | SAMN05661044_03358 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEK40061.1 | msrA-3 | SAMN05661044_00153 | SAMN05661044_04157 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEK40061.1 | msrA-4 | SAMN05661044_00153 | SAMN05661044_04664 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEK75905.1 | SEK40061.1 | SAMN05661044_01070 | SAMN05661044_00153 | Thiol-disulfide isomerase or thioredoxin. | Thiol-disulfide isomerase or thioredoxin. | 0.546 |
SEK75905.1 | SEM24662.1 | SAMN05661044_01070 | SAMN05661044_04663 | Thiol-disulfide isomerase or thioredoxin. | Thioredoxin. | 0.521 |
SEK75905.1 | SEM24700.1 | SAMN05661044_01070 | SAMN05661044_04665 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (R)-S-oxide reductase. | 0.767 |
SEK75905.1 | msrA | SAMN05661044_01070 | SAMN05661044_00243 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEK75905.1 | msrA-2 | SAMN05661044_01070 | SAMN05661044_03358 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEK75905.1 | msrA-3 | SAMN05661044_01070 | SAMN05661044_04157 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEK75905.1 | msrA-4 | SAMN05661044_01070 | SAMN05661044_04664 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEM24609.1 | SEM24662.1 | SAMN05661044_04660 | SAMN05661044_04663 | Hypothetical protein. | Thioredoxin. | 0.627 |
SEM24609.1 | SEM24700.1 | SAMN05661044_04660 | SAMN05661044_04665 | Hypothetical protein. | Peptide-methionine (R)-S-oxide reductase. | 0.817 |
SEM24609.1 | msrA | SAMN05661044_04660 | SAMN05661044_00243 | Hypothetical protein. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEM24609.1 | msrA-2 | SAMN05661044_04660 | SAMN05661044_03358 | Hypothetical protein. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEM24609.1 | msrA-3 | SAMN05661044_04660 | SAMN05661044_04157 | Hypothetical protein. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
SEM24609.1 | msrA-4 | SAMN05661044_04660 | SAMN05661044_04664 | Hypothetical protein. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.897 |
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