Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM31923.1 | SEM31948.1 | SAMN05661044_04853 | SAMN05661044_04854 | Hypothetical protein. | Hypothetical protein. | 0.542 |
SEM31923.1 | SEM31977.1 | SAMN05661044_04853 | SAMN05661044_04855 | Hypothetical protein. | Hypothetical protein. | 0.528 |
SEM31923.1 | SEM32002.1 | SAMN05661044_04853 | SAMN05661044_04856 | Hypothetical protein. | Hypothetical protein. | 0.494 |
SEM31923.1 | ftsY | SAMN05661044_04853 | SAMN05661044_04852 | Hypothetical protein. | Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.436 |
SEM31923.1 | rimO | SAMN05661044_04853 | SAMN05661044_04851 | Hypothetical protein. | Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.418 |
SEM31948.1 | SEM31923.1 | SAMN05661044_04854 | SAMN05661044_04853 | Hypothetical protein. | Hypothetical protein. | 0.542 |
SEM31948.1 | SEM31977.1 | SAMN05661044_04854 | SAMN05661044_04855 | Hypothetical protein. | Hypothetical protein. | 0.752 |
SEM31948.1 | SEM32002.1 | SAMN05661044_04854 | SAMN05661044_04856 | Hypothetical protein. | Hypothetical protein. | 0.698 |
SEM31977.1 | SEM31923.1 | SAMN05661044_04855 | SAMN05661044_04853 | Hypothetical protein. | Hypothetical protein. | 0.528 |
SEM31977.1 | SEM31948.1 | SAMN05661044_04855 | SAMN05661044_04854 | Hypothetical protein. | Hypothetical protein. | 0.752 |
SEM31977.1 | SEM32002.1 | SAMN05661044_04855 | SAMN05661044_04856 | Hypothetical protein. | Hypothetical protein. | 0.718 |
SEM32002.1 | SEM31923.1 | SAMN05661044_04856 | SAMN05661044_04853 | Hypothetical protein. | Hypothetical protein. | 0.494 |
SEM32002.1 | SEM31948.1 | SAMN05661044_04856 | SAMN05661044_04854 | Hypothetical protein. | Hypothetical protein. | 0.698 |
SEM32002.1 | SEM31977.1 | SAMN05661044_04856 | SAMN05661044_04855 | Hypothetical protein. | Hypothetical protein. | 0.718 |
ftsY | SEM31923.1 | SAMN05661044_04852 | SAMN05661044_04853 | Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | Hypothetical protein. | 0.436 |
ftsY | rimO | SAMN05661044_04852 | SAMN05661044_04851 | Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.826 |
rimO | SEM31923.1 | SAMN05661044_04851 | SAMN05661044_04853 | Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Hypothetical protein. | 0.418 |
rimO | ftsY | SAMN05661044_04851 | SAMN05661044_04852 | Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.826 |