STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM36455.1Fatty acid hydroxylase superfamily protein. (318 aa)    
Predicted Functional Partners:
SEK91726.1
Phytoene/squalene synthetase.
  
 0.967
SEM36559.1
Starch-binding associating with outer membrane.
 
     0.759
SEM36587.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.684
SEK36852.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
 0.680
SEM24743.1
Hypothetical protein.
  
     0.658
SEK72053.1
stearoyl-CoA desaturase (delta-9 desaturase).
  
 
 0.640
SEK67226.1
Sphingolipid delta-4 desaturase.
 
 
 0.620
SEM47102.1
Transposase zinc-ribbon domain-containing protein.
  
     0.619
SEL07278.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.615
SEM36384.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.609
Your Current Organism:
Pseudosphingobacterium domesticum
NCBI taxonomy Id: 407022
Other names: CCUG 54353, DSM 18733, LMG 23837, LMG:23837, Olivibacter domesticus, P. domesticum, Pseudosphingobacterium domesticum Vaz-Moreira et al. 2007 emend. Hahnke et al. 2016, strain DC-186
Server load: low (26%) [HD]