STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG74954.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)    
Predicted Functional Partners:
AKG74948.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.828
AKG74957.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.716
AKG74956.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.680
AKG74955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.678
AKG74953.1
Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.632
AKG74949.1
Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.581
AKG74952.1
Proline racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family.
       0.528
AKG74951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.524
AKG74507.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.508
AKG74950.1
Antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
Your Current Organism:
Salinicoccus halodurans
NCBI taxonomy Id: 407035
Other names: CGMCC 1.6501, DSM 19336, S. halodurans, Salinicoccus halodurans Wang et al. 2008, Salinicoccus sp. W24, strain W24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.