Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDJ66373.1 | SDJ66391.1 | SAMN05216243_0163 | SAMN05216243_0164 | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AA. | 0.613 |
| SDJ66373.1 | SDJ66397.1 | SAMN05216243_0163 | SAMN05216243_0165 | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AB. | 0.647 |
| SDJ66373.1 | SDJ66418.1 | SAMN05216243_0163 | SAMN05216243_0166 | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AE. | 0.467 |
| SDJ66373.1 | SDJ66435.1 | SAMN05216243_0163 | SAMN05216243_0167 | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AF. | 0.852 |
| SDJ66373.1 | SDK60632.1 | SAMN05216243_0163 | SAMN05216243_0053 | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage II sporulation protein E. | 0.743 |
| SDJ66373.1 | spoIIAB | SAMN05216243_0163 | SAMN05216243_0162 | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.985 |
| SDJ66391.1 | SDJ66373.1 | SAMN05216243_0164 | SAMN05216243_0163 | Stage V sporulation protein AA. | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.613 |
| SDJ66391.1 | SDJ66397.1 | SAMN05216243_0164 | SAMN05216243_0165 | Stage V sporulation protein AA. | Stage V sporulation protein AB. | 0.963 |
| SDJ66391.1 | SDJ66418.1 | SAMN05216243_0164 | SAMN05216243_0166 | Stage V sporulation protein AA. | Stage V sporulation protein AE. | 0.719 |
| SDJ66391.1 | SDJ66435.1 | SAMN05216243_0164 | SAMN05216243_0167 | Stage V sporulation protein AA. | Stage V sporulation protein AF. | 0.731 |
| SDJ66391.1 | SDJ67083.1 | SAMN05216243_0164 | SAMN05216243_0208 | Stage V sporulation protein AA. | Spore germination protein. | 0.533 |
| SDJ66391.1 | SDJ68037.1 | SAMN05216243_0164 | SAMN05216243_0266 | Stage V sporulation protein AA. | Protein of unknown function. | 0.533 |
| SDJ66391.1 | SDJ75087.1 | SAMN05216243_0164 | SAMN05216243_0651 | Stage V sporulation protein AA. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.543 |
| SDJ66391.1 | SDK54507.1 | SAMN05216243_0164 | SAMN05216243_3513 | Stage V sporulation protein AA. | MFS transporter, YQGE family, putative transporter. | 0.582 |
| SDJ66391.1 | SDK60632.1 | SAMN05216243_0164 | SAMN05216243_0053 | Stage V sporulation protein AA. | Stage II sporulation protein E. | 0.614 |
| SDJ66391.1 | spoIIAB | SAMN05216243_0164 | SAMN05216243_0162 | Stage V sporulation protein AA. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.591 |
| SDJ66397.1 | SDJ66373.1 | SAMN05216243_0165 | SAMN05216243_0163 | Stage V sporulation protein AB. | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.647 |
| SDJ66397.1 | SDJ66391.1 | SAMN05216243_0165 | SAMN05216243_0164 | Stage V sporulation protein AB. | Stage V sporulation protein AA. | 0.963 |
| SDJ66397.1 | SDJ66418.1 | SAMN05216243_0165 | SAMN05216243_0166 | Stage V sporulation protein AB. | Stage V sporulation protein AE. | 0.771 |
| SDJ66397.1 | SDJ66435.1 | SAMN05216243_0165 | SAMN05216243_0167 | Stage V sporulation protein AB. | Stage V sporulation protein AF. | 0.772 |
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