STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ66624.1Peroxiredoxin. (189 aa)    
Predicted Functional Partners:
SDJ66638.1
Cytochrome c biogenesis protein.
 
  
 0.907
SDJ70431.1
Cytochrome c-type biogenesis protein.
  
 0.882
SDJ66654.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.835
SDJ66692.1
Two-component system, OmpR family, sensor histidine kinase ResE.
  
  
 0.661
SDJ66605.1
23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family.
  
    0.655
SDJ66668.1
Two-component system, OmpR family, response regulator ResD.
  
 
  0.503
SDJ66577.1
Spore maturation protein A.
       0.500
SDJ66589.1
Spore maturation protein B.
       0.500
SDJ66560.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
    0.474
SDK27478.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
  
  0.446
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.