STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ66692.1Two-component system, OmpR family, sensor histidine kinase ResE. (589 aa)    
Predicted Functional Partners:
SDJ66668.1
Two-component system, OmpR family, response regulator ResD.
 0.984
SDJ67431.1
Chemotaxis protein methyltransferase CheR.
   
  0.943
SDK22474.1
Two-component system, OmpR family, response regulator VicR.
 0.941
SDK30313.1
Two-component system, OmpR family, response regulator CssR.
 0.937
SDK42748.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.920
SDK17745.1
Ribose transport system substrate-binding protein.
 
   
  0.913
SDK34825.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.816
SDJ66654.1
Cytochrome c-type biogenesis protein CcsB.
  
  
 0.777
SDK41120.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.759
SDK20836.1
Two-component system, OmpR family, bacitracin resistance response regulator BceR.
 0.739
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.