STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ67099.1c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains. (218 aa)    
Predicted Functional Partners:
SDK03839.1
Negative regulator of flagellin synthesis FlgM.
 
  
 0.914
SDK03863.1
FlgN protein.
 
  
 0.903
SDK04247.1
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
    0.837
SDJ72281.1
Flagellar FliL protein.
 
  
 0.830
SDK04263.1
Flagellar protein FliS.
 
  
 0.814
SDJ72202.1
Flagellar protein FliO/FliZ.
 
    0.802
flgK
Flagellar hook-associated protein 1 FlgK.
 
  
 0.788
SDJ72419.1
Flagellar FliJ protein.
 
    0.766
SDJ72765.1
Hypothetical protein.
  
     0.764
SDJ72267.1
Flagellar motor switch protein FliM.
 
 
 0.762
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.