STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ69453.1Gluconate 2-dehydrogenase alpha chain. (579 aa)    
Predicted Functional Partners:
SDJ69486.1
Gluconate 2-dehydrogenase gamma chain.
 0.983
SDJ69420.1
Cytochrome c551.
 
 
 
 0.882
SDJ67574.1
Tetratricopeptide repeat-containing protein.
    
 0.793
SDK52144.1
Tetratricopeptide repeat-containing protein.
    
 0.793
SDJ76970.1
Protein of unknown function.
    
 0.766
SDK03825.1
Flagellar operon protein TIGR03826.
    
 0.766
SDK04378.1
Cytochrome c551.
   
 
 0.736
SDK54059.1
Cytochrome c550.
   
 
 0.733
SDK26798.1
Prolyl oligopeptidase family protein.
    
 0.719
SDK07755.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.684
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.