STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ70620.1Minor extracellular protease Epr; Belongs to the peptidase S8 family. (639 aa)    
Predicted Functional Partners:
SDJ68910.1
BclB C-terminal domain-containing protein.
  
 0.538
SDJ72765.1
Hypothetical protein.
  
 0.538
SDJ84462.1
Hypothetical protein.
  
 0.538
SDJ98173.1
Alpha-1,2-mannosidase, putative.
  
 0.538
SDK36124.1
Collagen triple helix repeat-containing protein.
  
 0.538
SDK36869.1
Protein of unknown function.
  
 0.538
SDJ70593.1
Hypothetical protein.
       0.523
SDK06683.1
g-D-glutamyl-meso-diaminopimelate peptidase.
  
  
 0.504
SDK27895.1
Hypothetical protein.
  
 
 0.445
SDK49436.1
Collagen triple helix repeat-containing protein.
  
 
 0.445
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.