STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ76862.1Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose). (124 aa)    
Predicted Functional Partners:
SDJ76846.1
Uncharacterized membrane protein YfhO.
  
 0.963
SDJ76878.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.948
SDJ85819.1
Right handed beta helix region.
  
     0.617
SDK05106.1
Hypothetical protein.
  
     0.530
SDJ87964.1
Predicted arabinose efflux permease, MFS family.
  
     0.493
SDJ76892.1
Hypothetical protein.
       0.485
SDK13756.1
Spore maturation protein CgeB.
  
 
  0.485
SDK14211.1
CDP-glycerol glycerophosphotransferase.
  
 
 0.479
SDK23409.1
Hypothetical protein.
  
     0.474
SDK16579.1
Immune inhibitor A peptidase M6.
  
     0.473
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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