STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ78244.1Protein N-acetyltransferase, RimJ/RimL family. (185 aa)    
Predicted Functional Partners:
SDJ69557.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.663
SDK44018.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase.
    
  0.663
SDJ74842.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.626
SDJ65564.1
Acetyltransferase (GNAT) family protein.
 
 
 
  0.603
SDK48951.1
Predicted amidohydrolase.
    
  0.567
SDK08737.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.560
SDJ84790.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.559
SDK06972.1
3-hydroxyacyl-CoA dehydrogenase.
    
  0.502
SDK00442.1
L-ornithine N5-oxygenase.
  
 
  0.457
SDK19037.1
Lysine N6-hydroxylase.
  
 
  0.457
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.