STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ87041.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (311 aa)    
Predicted Functional Partners:
SDJ87082.1
Oligopeptide transport system permease protein.
 
 0.999
SDJ87100.1
Oligopeptide transport system permease protein.
 
 0.998
SDJ87055.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.994
SDJ87125.1
Oligopeptide transport system substrate-binding protein.
 
 0.993
SDK14883.1
Dipeptide transport system permease protein.
 
 0.991
SDK03158.1
Peptide/nickel transport system permease protein/oligopeptide transport system permease protein.
 
 0.989
SDK05129.1
Peptide/nickel transport system permease protein.
 
 0.988
SDK14900.1
Dipeptide transport system permease protein.
 
 0.943
SDK16139.1
Peptide/nickel transport system permease protein.
  
 
 0.938
SDK03139.1
Peptide/nickel transport system permease protein.
 
 0.921
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.