STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ88111.1Competence protein ComK. (169 aa)    
Predicted Functional Partners:
SDK41576.1
Hypothetical protein.
  
     0.766
SDK44221.1
Uncharacterized protein YtpQ, UPF0354 family; Belongs to the UPF0354 family.
  
     0.754
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.745
SDK55130.1
Competence protein ComGD.
  
     0.734
SDK43079.1
Hypothetical protein.
  
     0.733
SDJ72419.1
Flagellar FliJ protein.
  
     0.731
SDJ67921.1
Uncharacterized protein YpmB.
  
     0.713
SDJ68611.1
YqfQ-like protein.
  
     0.705
SDK44587.1
Hypothetical protein.
  
     0.701
SDK15976.1
Uncharacterized beta-barrel protein YwiB, DUF1934 family.
  
     0.696
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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