STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ88383.1Penicillin-binding protein 2A. (720 aa)    
Predicted Functional Partners:
SDJ74295.1
Penicillin-binding protein 2B.
 
 
 0.907
SDJ85943.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.885
SDJ74281.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
 
 0.811
gpsB
DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.762
SDJ80252.1
N-acetylmuramoyl-L-alanine amidase.
   
 0.666
SDK54532.1
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.655
SDJ74172.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.650
SDK03498.1
Penicillin-binding protein.
  
 
 0.641
SDJ75033.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.632
SDK28640.1
Rod shape determining protein RodA; Belongs to the SEDS family.
  
 
 
 0.630
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.