STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ88990.1DNA-binding transcriptional regulator GbsR, MarR family; Belongs to the GbsR family. (183 aa)    
Predicted Functional Partners:
SDK54366.1
NfeD-like C-terminal, partner-binding.
  
     0.648
SDJ87573.1
Scaffold protein Nfu/NifU N terminal.
  
     0.624
SDK30834.1
Glutaredoxin.
  
     0.611
SDK22827.1
Uncharacterized membrane protein YkvI.
  
     0.596
SDK23257.1
Protein of unknown function.
  
     0.590
SDJ89022.1
Uncharacterized protein YhaN.
       0.584
SDJ89044.1
DNA repair exonuclease SbcCD nuclease subunit.
       0.583
SDJ72382.1
Flagellar hook-length control protein FliK.
  
     0.533
SDJ88981.1
3'-5' exoribonuclease.
       0.490
SDK06800.1
Hypothetical protein.
  
     0.481
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.