STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ97222.1Beta-galactosidase. (581 aa)    
Predicted Functional Partners:
SDJ97194.1
Beta-galactosidase.
 
  
  0.908
SDJ97154.1
Beta-galactosidase/evolved beta-galactosidase subunit alpha.
 
 
 0.875
SDJ99376.1
Beta-galactosidase.
 
 
 0.835
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 
  
   0.783
SDK18591.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.767
SDK00274.1
Glycosyl hydrolases family 2; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.739
SDJ78064.1
Alpha-galactosidase.
 
  
 0.714
carB-2
Carbamoyl-phosphate synthase large subunit.
 
      0.653
SDJ97173.1
Arabinogalactan endo-1,4-beta-galactosidase.
 
  
 0.642
SDK00983.1
Beta-galactosidase.
  
  
  0.629
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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