STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ98992.1Hypothetical protein. (45 aa)    
Predicted Functional Partners:
SDJ98963.1
Predicted dehydrogenase.
       0.773
SDJ98981.1
FAD dependent oxidoreductase.
       0.773
SDJ99010.1
Sugar phosphate isomerase/epimerase.
       0.563
SDJ99030.1
Hypothetical protein.
       0.548
SDJ99049.1
Predicted dehydrogenase.
       0.548
SDJ98904.1
Predicted dehydrogenase.
       0.456
SDJ98879.1
D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family.
       0.442
SDJ99080.1
Glucokinase.
       0.435
SDJ99092.1
N-acetylglucosamine-6-phosphate deacetylase.
       0.430
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.