STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK03217.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (328 aa)    
Predicted Functional Partners:
SDK03158.1
Peptide/nickel transport system permease protein/oligopeptide transport system permease protein.
 
  0.996
SDK05129.1
Peptide/nickel transport system permease protein.
 
  0.987
SDK14883.1
Dipeptide transport system permease protein.
 
  0.987
SDJ87082.1
Oligopeptide transport system permease protein.
 
  0.985
SDK03239.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.979
SDK03139.1
Peptide/nickel transport system permease protein.
 
  0.949
SDK16139.1
Peptide/nickel transport system permease protein.
  
 
 0.942
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
    
0.905
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.904
ftsE
Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.899
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.