STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK04438.1Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. (470 aa)    
Predicted Functional Partners:
SDK04416.1
Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.936
ftsE
Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.923
SDK59935.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
  
 0.875
SDK18472.1
3D (Asp-Asp-Asp) domain-containing protein.
 
 
 0.819
SDK21336.1
3D (Asp-Asp-Asp) domain-containing protein; Manually curated.
  
 
 0.819
SDJ72239.1
Flagellar motor switch protein FliN/FliY.
   
   0.797
SDK02110.1
Peptidoglycan endopeptidase LytE.
  
 
 0.743
SDK13816.1
Peptidoglycan endopeptidase LytE.
  
 
 0.743
SDK13853.1
Peptidoglycan endopeptidase LytE.
 
 
 0.743
SDK04454.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
 
 
 
 0.700
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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