Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDJ67431.1 | SDJ72010.1 | SAMN05216243_0228 | SAMN05216243_0493 | Chemotaxis protein methyltransferase CheR. | Purine-binding chemotaxis protein CheW. | 0.962 |
| SDJ67431.1 | SDJ72033.1 | SAMN05216243_0228 | SAMN05216243_0494 | Chemotaxis protein methyltransferase CheR. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.986 |
| SDJ67431.1 | SDJ99695.1 | SAMN05216243_0228 | SAMN05216243_1498 | Chemotaxis protein methyltransferase CheR. | Purine-binding chemotaxis protein CheW. | 0.960 |
| SDJ67431.1 | SDK06524.1 | SAMN05216243_0228 | SAMN05216243_1840 | Chemotaxis protein methyltransferase CheR. | Purine-binding chemotaxis protein CheW. | 0.959 |
| SDJ67431.1 | SDK09275.1 | SAMN05216243_0228 | SAMN05216243_1963 | Chemotaxis protein methyltransferase CheR. | Methyl-accepting chemotaxis protein. | 0.900 |
| SDJ67431.1 | SDK34825.1 | SAMN05216243_0228 | SAMN05216243_2827 | Chemotaxis protein methyltransferase CheR. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.979 |
| SDJ67431.1 | SDK43705.1 | SAMN05216243_0228 | SAMN05216243_3170 | Chemotaxis protein methyltransferase CheR. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.717 |
| SDJ67431.1 | cheB | SAMN05216243_0228 | SAMN05216243_0495 | Chemotaxis protein methyltransferase CheR. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
| SDJ67431.1 | cheD | SAMN05216243_0228 | SAMN05216243_0491 | Chemotaxis protein methyltransferase CheR. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.925 |
| SDJ72010.1 | SDJ67431.1 | SAMN05216243_0493 | SAMN05216243_0228 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein methyltransferase CheR. | 0.962 |
| SDJ72010.1 | SDJ72033.1 | SAMN05216243_0493 | SAMN05216243_0494 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
| SDJ72010.1 | SDJ99695.1 | SAMN05216243_0493 | SAMN05216243_1498 | Purine-binding chemotaxis protein CheW. | Purine-binding chemotaxis protein CheW. | 0.549 |
| SDJ72010.1 | SDK06524.1 | SAMN05216243_0493 | SAMN05216243_1840 | Purine-binding chemotaxis protein CheW. | Purine-binding chemotaxis protein CheW. | 0.556 |
| SDJ72010.1 | SDK09275.1 | SAMN05216243_0493 | SAMN05216243_1963 | Purine-binding chemotaxis protein CheW. | Methyl-accepting chemotaxis protein. | 0.931 |
| SDJ72010.1 | SDK34825.1 | SAMN05216243_0493 | SAMN05216243_2827 | Purine-binding chemotaxis protein CheW. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.842 |
| SDJ72010.1 | SDK43705.1 | SAMN05216243_0493 | SAMN05216243_3170 | Purine-binding chemotaxis protein CheW. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.709 |
| SDJ72010.1 | cheB | SAMN05216243_0493 | SAMN05216243_0495 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.991 |
| SDJ72010.1 | cheD | SAMN05216243_0493 | SAMN05216243_0491 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.983 |
| SDJ72033.1 | SDJ67431.1 | SAMN05216243_0494 | SAMN05216243_0228 | Two-component system, chemotaxis family, sensor kinase CheA. | Chemotaxis protein methyltransferase CheR. | 0.986 |
| SDJ72033.1 | SDJ72010.1 | SAMN05216243_0494 | SAMN05216243_0493 | Two-component system, chemotaxis family, sensor kinase CheA. | Purine-binding chemotaxis protein CheW. | 0.999 |
page 1 of 5