STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK30026.1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (159 aa)    
Predicted Functional Partners:
SDJ75620.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
   
 0.818
SDK30834.1
Glutaredoxin.
  
 0.747
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.704
msrA-3
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.704
SDJ82572.1
Fatty-acid peroxygenase.
   
 0.668
SDJ65120.1
Dihydrolipoamide dehydrogenase.
  
 0.622
SDJ75338.1
Dihydrolipoamide dehydrogenase.
  
 0.622
SDK06379.1
Glutaredoxin.
  
 0.580
SDK06823.1
Glutaredoxin.
  
 0.577
SDK05630.1
Glutaredoxin.
  
 0.563
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.