STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK30441.1Acetoin utilization transport system permease protein. (447 aa)    
Predicted Functional Partners:
SDK30464.1
Acetoin utilization transport system ATP-binding protein.
 0.992
SDJ79440.1
Putative ABC transport system ATP-binding protein/lipoprotein-releasing system ATP-binding protein.
 0.912
SDK20872.1
Bacitracin transport system ATP-binding protein.
 0.909
SDJ85568.1
Putative ABC transport system ATP-binding protein.
 0.888
SDK31116.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.845
SDJ85592.1
Putative ABC transport system permease protein.
  
 
 0.652
SDK20850.1
Two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS.
 
 
 0.649
SDJ82363.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.619
SDK23684.1
Spore germination protein (amino acid permease).
  
     0.555
SDJ87656.1
Putative efflux protein, MATE family.
 
     0.517
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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