STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK33595.1Zinc-ribbon containing domain-containing protein. (128 aa)    
Predicted Functional Partners:
SDK08031.1
Putative membrane protein.
  
    0.780
SDJ65034.1
Protein of unknown function.
  
     0.775
SDJ67320.1
Hypothetical protein.
  
     0.775
SDJ67664.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
  
     0.775
SDJ70360.1
Protein of unknown function.
  
     0.775
SDJ74802.1
YugN-like family protein.
  
     0.775
SDK55027.1
Protein of unknown function.
  
     0.775
SDK57198.1
KinB signaling pathway activation protein.
  
     0.775
SDJ74894.1
Cytochrome c oxidase subunit 4.
  
     0.774
SDJ75129.1
YlaH-like protein.
  
     0.774
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.