STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK36726.1Thioredoxin reductase. (299 aa)    
Predicted Functional Partners:
SDJ69557.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.791
SDK36711.1
Methyltransferase domain-containing protein.
      0.765
SDK36769.1
Rrf2 family protein.
 
   
 0.722
SDJ75620.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 
 0.708
SDK41895.1
Thioredoxin 1; Belongs to the thioredoxin family.
  
 0.684
SDJ77419.1
Thioredoxin 1; Contains selenocysteine; manually curated; Belongs to the thioredoxin family.
  
 0.683
SDK04902.1
Thioredoxin reductase (NADPH).
  
  
 
0.580
SDK07321.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.576
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.539
SDJ78642.1
Thioredoxin; Contains selenocysteine; manually curated.
  
 0.520
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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