STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK42333.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SDJ82965.1
YpjP-like protein.
  
     0.710
SDK26636.1
Transmembrane transcriptional regulator (anti-sigma factor RsiW).
  
  
 0.709
SDJ88860.1
Putative zincin peptidase.
  
     0.691
SDJ70530.1
Site-specific DNA recombinase.
  
     0.651
SDJ73003.1
Uncharacterized protein YfkK, UPF0435 family.
  
     0.633
SDK42325.1
Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily.
 
     0.618
SDK42042.1
Putative membrane protein.
  
     0.590
SDK08876.1
Hypothetical protein.
  
     0.564
SDJ67367.1
Heptaprenyl diphosphate synthase.
  
     0.543
SDK26954.1
MFS transporter, DHA1 family, purine base/nucleoside efflux pump.
  
     0.533
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.