STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK43426.1Site-specific DNA-methyltransferase (adenine-specific). (330 aa)    
Predicted Functional Partners:
SDJ86933.1
Competence protein CoiA-like family, contains a predicted nuclease domain.
  
     0.755
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
 
     0.753
SDJ67574.1
Tetratricopeptide repeat-containing protein.
  
     0.733
SDJ77194.1
Phosphatidylglycerol lysyltransferase.
   
    0.723
SDJ70449.1
Hypothetical protein.
  
     0.682
SDK36648.1
Protein involved in sex pheromone biosynthesis.
  
     0.681
SDK44729.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.656
mtnN
Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
   
 
  0.652
SDK54924.1
Phosphoglycerol transferase MdoB; Belongs to the LTA synthase family.
  
     0.650
SDK43108.1
Phosphoesterase RecJ domain-containing protein.
  
     0.634
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.