STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK44636.1MFS transporter, PPP family, 3-phenylpropionic acid transporter. (392 aa)    
Predicted Functional Partners:
SDK44615.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.790
SDK44587.1
Hypothetical protein.
       0.783
SDK44656.1
Voltage-gated potassium channel.
       0.682
SDK07781.1
Homoserine dehydrogenase.
   
  0.640
SDK44570.1
Lipid kinase, YegS/Rv2252/BmrU family.
 
     0.624
SDK06341.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
   
 
  0.528
SDK44679.1
DeoR-like helix-turn-helix domain-containing protein.
       0.468
SDK20345.1
Immune inhibitor A.
  
     0.433
SDJ75193.1
Hypothetical protein.
  
     0.432
SDK26798.1
Prolyl oligopeptidase family protein.
     
 0.431
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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