STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK54059.1Cytochrome c550. (130 aa)    
Predicted Functional Partners:
SDJ74959.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.999
SDK16506.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.999
SDJ67664.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
 
 0.975
SDJ67629.1
Menaquinol-cytochrome c reductase iron-sulfur subunit.
 
 0.974
SDJ68817.1
Glycine/D-amino acid oxidase.
  
 0.958
SDJ80406.1
Glycine/D-amino acid oxidase.
  
 0.958
SDJ75073.1
Hypothetical protein.
 
 
 0.953
SDJ67643.1
Menaquinol-cytochrome c reductase cytochrome b subunit.
 
 0.952
SDK30542.1
Protein of unknown function.
 
 0.910
SDJ74915.1
Cytochrome c oxidase subunit 3.
 
 0.872
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.