STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK55676.1Stage III sporulation protein AD. (129 aa)    
Predicted Functional Partners:
SDK55696.1
Stage III sporulation protein AE.
 
  
 0.988
SDK55656.1
Stage III sporulation protein AC.
 
  
 0.986
SDK55632.1
Stage III sporulation protein AB.
 
  
 0.968
SDK55601.1
Stage III sporulation protein AA.
 
  
 0.962
SDK55721.1
Stage III sporulation protein AF.
  
  
 0.941
SDK55747.1
Stage III sporulation protein AG.
 
  
 0.936
SDJ67332.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
    0.851
SDK53602.1
Sporulation protein YqfC.
  
  
 0.791
SDK14689.1
Transcriptional regulator.
  
    0.787
SDJ66172.1
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
  
 0.782
Your Current Organism:
Sediminibacillus albus
NCBI taxonomy Id: 407036
Other names: CGMCC 1.6502, DSM 19340, S. albus, Sediminibacillus albus Wang et al. 2009, Virgibacillus sp. NHBX5, strain NHBX5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.