Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T459_34939Stress-induced protein 11. (96 aa)    
Predicted Functional Partners:
T459_34206
Embryogenic cell protein 40; Belongs to the plant dehydrin family.
  
   
 0.606
T459_04167
Dehydrin DHN2; Belongs to the plant dehydrin family.
  
   
 0.603
T459_04090
Dehydrin DHN2; Belongs to the plant dehydrin family.
  
   
 0.554
T459_26637
Late embryogenesis abundant protein.
  
   
 0.553
T459_15199
Uncharacterized protein.
  
   
 0.539
T459_33715
Uncharacterized protein.
  
     0.535
T459_19461
Uncharacterized protein.
  
     0.534
T459_29952
Uncharacterized protein.
  
     0.531
T459_20015
Uncharacterized protein.
  
     0.531
T459_24981
Uncharacterized protein.
  
     0.530
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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