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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nad9NADH dehydrogenase [ubiquinone] iron-sulfur protein 3; Belongs to the complex I 30 kDa subunit family. (190 aa)    
Predicted Functional Partners:
nad4L
NADH-ubiquinone oxidoreductase chain 4L.
   
 0.995
T459_06898
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 0.994
T459_01412
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; Belongs to the complex I LYR family.
   
 0.993
T459_00387
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B.
   
 0.993
Nad1
NADH-ubiquinone oxidoreductase chain 1.
  
 0.992
Nad5
NADH-ubiquinone oxidoreductase chain 5.
  
 0.992
Nad3
NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
  
 0.992
T459_07592
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.
   
 0.992
T459_14281
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
 0.991
Nad7
Complex1_49kDa domain-containing protein.
 
 0.991
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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