STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_26824Uncharacterized protein. (672 aa)    
Predicted Functional Partners:
T459_26277
Aluminum-activated malate transporter 8.
  
     0.490
T459_00876
Protein TORNADO 2; Belongs to the tetraspanin (TM4SF) family.
  
     0.469
T459_28578
WHy domain-containing protein.
  
     0.461
T459_07207
Uncharacterized protein.
  
     0.459
T459_23829
Uncharacterized protein.
  
     0.456
T459_25747
Uncharacterized protein.
  
     0.442
T459_08913
Transcription factor UNE12.
  
     0.439
T459_32151
BZIP domain-containing protein.
  
     0.438
T459_04783
NAC domain-containing protein.
  
     0.429
T459_00298
TFIIS central domain-containing protein.
  
     0.428
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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