STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_044563-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (344 aa)    
Predicted Functional Partners:
T459_23728
3-hydroxyisobutyryl-CoA hydrolase-like protein 5; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.958
T459_14716
3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.956
T459_03286
3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.953
T459_31747
3-hydroxyisobutyryl-CoA hydrolase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.946
T459_03137
3-hydroxyisobutyryl-CoA hydrolase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.946
T459_31751
3-hydroxyisobutyryl-CoA hydrolase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.946
T459_08145
3-hydroxyisobutyryl-CoA hydrolase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.946
T459_03127
3-hydroxyisobutyryl-CoA hydrolase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.946
T459_31943
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial.
   
 0.939
T459_16870
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.929
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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