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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_05344Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
T459_06443
DNA ligase.
    
 0.840
T459_21888
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.788
T459_07272
ATP-dependent DNA helicase 2 subunit KU70.
    
 0.724
T459_28779
RuvB-like helicase; Belongs to the RuvB family.
    
 0.717
T459_23543
Regulatory-associated protein of TOR 2.
  
 0.709
T459_07176
Uncharacterized protein.
    
 0.705
T459_06263
Uncharacterized protein.
   
 0.704
T459_06264
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.704
T459_21535
Putative ethanolamine kinase.
    
 0.677
T459_31988
Peptidylprolyl isomerase.
    
 
 0.663
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.