STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T459_06792Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
T459_06585
Uncharacterized protein.
   
  
 0.761
T459_07618
Uncharacterized protein.
   
  
 0.610
T459_15239
Uncharacterized protein.
   
  
 0.610
T459_10498
Late embryogenesis abundant protein Dc3.
   
  
 0.599
T459_32207
Uncharacterized protein.
      
 0.568
T459_13011
Uncharacterized protein.
      
 0.554
T459_11748
Uncharacterized protein.
      
 0.551
T459_24910
Protein root UVB sensitive 6.
      
 0.546
T459_32652
Poly [ADP-ribose] polymerase.
      
 0.544
T459_02277
Poly [ADP-ribose] polymerase 3.
      
 0.544
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.