STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_09967Serine/threonine-protein phosphatase. (303 aa)    
Predicted Functional Partners:
T459_16736
Uncharacterized protein.
    
 0.925
T459_28769
Uncharacterized protein.
    
 0.925
T459_18185
Uncharacterized protein.
    
 0.925
T459_04996
Uncharacterized protein.
    
 0.925
T459_31473
PP2A regulatory subunit TAP46.
   
 
 0.896
T459_01628
Uncharacterized protein.
   
 
 0.896
T459_01629
PP2A regulatory subunit TAP46.
   
 
 0.896
T459_09077
Uncharacterized protein.
    
 0.870
T459_21140
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.830
T459_03253
Leucine carboxyl methyltransferase 1 homolog; Involved in brassinosteroid (BR) signaling.
    
 0.695
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.