STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_08544Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
T459_31870
Uncharacterized protein.
  
    0.539
T459_33559
Uncharacterized protein.
  
     0.526
T459_31275
X8 domain-containing protein.
  
     0.523
T459_33124
PRONE domain-containing protein.
  
     0.518
T459_27949
Uncharacterized protein.
  
     0.512
T459_02688
Cupin type-1 domain-containing protein.
  
     0.512
T459_23196
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
  
     0.510
T459_04026
AT-hook motif nuclear-localized protein 10.
  
     0.510
T459_31308
Uncharacterized protein.
  
     0.509
T459_25260
CCHC-type domain-containing protein.
  
     0.509
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.