STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_06213Rhodanese-like domain-containing protein 17. (143 aa)    
Predicted Functional Partners:
T459_10914
30S ribosomal protein S17, chloroplastic; Belongs to the universal ribosomal protein uS17 family.
   
   0.862
T459_21438
Uncharacterized protein.
   
   0.848
T459_33254
50S ribosomal protein L24, chloroplastic; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.824
T459_18012
Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
    
 0.820
T459_13767
L51_S25_CI-B8 domain-containing protein.
    
   0.814
T459_05041
2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal.
   
   0.814
T459_33229
Rho GTPase-activating protein 2.
   
   0.768
T459_12744
Uncharacterized protein.
   
   0.768
T459_07007
AKAP7_NLS domain-containing protein.
    
   0.758
T459_10903
KH domain-containing protein.
    
   0.758
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.