STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_19314Putative chlorophyll(Ide) b reductase NYC1, chloroplastic. (494 aa)    
Predicted Functional Partners:
T459_23455
Chlorophyll synthase, chloroplastic.
   
 0.956
T459_07599
7-hydroxymethyl chlorophyll a reductase, chloroplastic.
    
 0.955
T459_16883
Chlorophyllide a oxygenase, chloroplastic.
    
 0.952
T459_11857
Chlorophyllide a oxygenase, chloroplastic.
    
 0.952
T459_18498
Uncharacterized protein.
    
 0.948
T459_07982
Chlorophyllase-2, chloroplastic.
     
  0.900
T459_10675
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
   
 0.654
T459_00605
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.646
LLS1
Pheophorbide a oxygenase, chloroplastic.
  
 
 0.644
T459_02709
Pheophytinase, chloroplastic.
   
 0.604
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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