Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T459_35295Cysteine-rich receptor-like protein kinase 25; Belongs to the protein kinase superfamily. (403 aa)    
Predicted Functional Partners:
T459_35411
ABC transporter B family member 11.
     
 0.863
T459_31429
ABC transporter B family member 11.
     
 0.863
T459_15631
ABC transporter B family member 11.
     
 0.863
T459_28753
Ripening-related protein grip22.
      
 0.861
T459_28752
Ripening-related protein grip22.
      
 0.861
T459_28754
Ripening-related protein grip22.
      
 0.861
T459_10476
Chitin-binding lectin 1.
      
 0.860
T459_10478
Chitin-binding type-1 domain-containing protein.
      
 0.860
T459_10484
Chitin-binding type-1 domain-containing protein.
      
 0.860
T459_10477
Uncharacterized protein.
      
 0.860
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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