STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_34644Photosystem I chlorophyll a apoprotein A2. (410 aa)    
Predicted Functional Partners:
T459_19736
Uncharacterized protein.
 
     0.588
T459_12023
CYTB_NTER domain-containing protein.
  
 
 0.584
T459_01976
Uncharacterized protein.
 
     0.577
T459_14392
CYTB_NTER domain-containing protein.
  
 
 0.574
T459_25444
Apocytochr_F_N domain-containing protein.
  
 
 0.571
T459_03786
Apocytochr_F_N domain-containing protein.
  
 
 0.552
T459_34522
Photosystem I assembly protein Ycf3.
  
 
 0.551
petA
Cytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
  
 
 0.550
T459_16074
Cytochrome f.
  
 
 0.549
T459_08837
Uncharacterized protein.
  
     0.542
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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