STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_26795Putative serine/threonine-protein kinase. (654 aa)    
Predicted Functional Partners:
T459_32710
Calcium-dependent protein kinase 1; Belongs to the protein kinase superfamily.
  
  0.429
T459_00904
Protein kinase domain-containing protein.
  
  0.423
T459_26310
Calcium-dependent protein kinase 2; Belongs to the protein kinase superfamily.
  
  0.420
T459_17982
Calcium-dependent protein kinase 8.
  
  0.419
T459_28867
Protein PEROXIN-4; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.415
T459_22040
CDPK-related kinase 4.
  
  0.406
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.